CDS
| Accession Number | TCMCG066C08089 |
| gbkey | CDS |
| Protein Id | XP_034580448.1 |
| Location | join(39550481..39550591,39551823..39552026,39552101..39552136,39552225..39552337,39553497..39553542,39554098..39554144,39554259..39554366,39554566..39554641,39555530..39555602,39555697..39555842,39555949..39556034,39556619..39556758,39556827..39556966,39557045..39557095,39557436..39557499,39558093..39558236,39558832..39558899,39559008..39559066,39559160..39559316,39560209..39560261,39560343..39560441,39560846..39560960,39561041..39561163,39561411..39561578) |
| Gene | LOC117843835 |
| GeneID | 117843835 |
| Organism | Setaria viridis |
Protein
| Length | 808aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA633601 |
| db_source | XM_034724557.1 |
| Definition | DNA mismatch repair protein MSH4 isoform X2 [Setaria viridis] |
EGGNOG-MAPPER Annotation
| COG_category | L |
| Description | DNA mismatch repair protein |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko03400 [VIEW IN KEGG] |
| KEGG_ko |
ko:K08740
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs | - |
Sequence
| CDS: ATGAAGGACGGCGCCGCTGGAGCCGACGGAGGCGGAGGCCACGGAGGAGGAGGAGGAGGCGGAGAGGGGTCGAGCTTCGTGATCGGCCTCATCGAGAACCGCGCCAAGGAGGTTGGCGTTGCGGCCTTTGATTTGAGATCAGCTGCGCTGCACCTATCTCAGTATATTGAGACAAGTCGCTCATACCACAATACAAAAACACTACTTCATTTCTATGATCCCATGGTTGTCATTGTGCCCCCAAACAAAACAGCAGCAGATGGTATGGTTGGAGTTTCAGAGCTGGTAGGTAAACATTACCCAGCAAACAAAAAGGTCACAATGGCACGTGGTTGCTTTGATGATACGAAGGGTGCTGTCATGGTGAAAAATCTTTCAGCTAGAGACCCATCTGCGCTTGGTTTAGACACTTACTGCAAGCAGTATTATCTTTGTCTTGCGGCTGCCTCTGCAACAATTAGGTGGATAGAATCAGAAAGGGGTGTATTTATTACCAACCACTCATTATCAGTTACATTCAATGGGTCATTCGACCATATGAACATTGACTCAACTAGTGTTCAAACATTGGAGATTATTGATCCTCTCCATACTGAACTATGGGGCACAAGCAACAAAAAGAAAAGCCTCTTTCAGATGTTGAAAACTACAAAGACTACAGGAGGGGCCAGACTTCTGAGAGCCAACTTATTACAGCCATTGAAAGATATTCAGACCATCAATGCTCGTCTAGACTGCTTGGATGAGCTAGTGACCAACGAGGAACTGTTTTTCGGATTGACTCAAGGTCTTCGTAAGTTTCCAAAAGAATCAGATAAGGTTCTCTGTCATTTCTGCTTCAAGCCCAAACCGGTTACGGATGAGGTATTGAAGCCTGCCAATGGTAGAAAGAGCCAGATGCTGATTTCTGATATTATTATTCTAAAGACTGCTCTGGACGCCATACCATTCTTCTCCAAGGTTTTGAAGGGAGCAAAGAGTTTTCTCCTTCGCAACATTTATCAGACTGTATGTGAAAACCCTAAATATGAAAATATGAGAAAGAGAATTGGAGATATCATTGACGAGGATGTGGTTCATTCAAGGGCTCCATTTGTAGCCTGCACTCAGCAATGTTTTGCTATTAAGGCAGGAGTTGATGGGCTGCTTGATGTTGCTCGTCGATCTTTCTGTGATACCAGCGAAGCCATACATAACCTCGCCAACAAGTACAGGGAAGAATATAATATGCCGACTCTGAAGATACCCTATAATATTAGGCAAGGATTTTACTTCATTATACCCCAGAAGGACATTACTGATAGGCTTCCTAATAAATTTATCCAGGTTGTTAGACATGGGAAGAATGTCCACTGCTCAAGCTTGGAGCTTGCTTCTCTAAATGTTAGGAACAAGTCAGCTGCTGCTGAGTGCTTCTTCCGCACGGAACTTTGTTTGGAAGGTCTTATTGACAAGATCAGAGAAGACATTGGTATCCTTACATTGCTCGCTGAAGTATTGTGTCTATTGGACATGATTGTAAACTCTTTTGCTCATACAATATCTACAAAGCCTGTTGATCGCTACACAAGACCGGAGTTCACAGATGATGGCCCAATGGCAATCAATGCTGGACGACATCCTATTCTGGAGACTTTGCATACTGATTTTGTTCCTAACAATACATTTCTCTCTGAAGCATCCAATATGGTTCTTGTCATGGGGCCAAATATGAGTGGCAAAAGCACATATCTCCATCAGATATGTTTAATTGTCATTCTTGCACAAATTGGCTGTTATGTTCCAGCTCAGTTTGCATCATTAAGAGTGGTTGATCGCATATTCACGCGGATTGGCAATGGGGATAATGTTGAAAACAACTCAAGTACGTTTATGACAGAAATGAAAGAAACAGCTTTCATCATGCAGAATGCTTCTTCAAAGAGCTTGATTGTTGTGGATGAGCTTGGAAGGGCAACATCTTCCGCTGATGGGTTGGCAATTGCATGGAGCTGCTGTGAACACCTTCTTTCTGTCAAAGCATACACTGTTTTTGCCACACACATGGAGAGCTTGTCAGAACTTGCAACGATGTATCCAAATGTGAATATCCTCCATTTCGAAGTCGACTTGAGAAATGATCGCTTGGATTTCAAGTTCCGCCTGAAGGATGGCGTCAGAGAGGTACCACACTATGGGCTTCTGCTGGCCAGGGTGGCCGGTCTCCCTGCTTCAGTGATTGACGCCGCGACGAGCATCACTTCACAGATCACAGAGCAGGAAATGACAAGGATGGATGCCAACTGCGAGGAGTTCCAGTCTCTTCGGATGGCGTACCAGGTCGCGCAGCGGCTTGTATGCCTGAAGTACTCGAACCAAGGCGATGACTACATCCGTGAAGCGCTGCGAAATCTCAAGGAGGGCTATACTGCAGGCCGGCTAACATGA |
| Protein: MKDGAAGADGGGGHGGGGGGGEGSSFVIGLIENRAKEVGVAAFDLRSAALHLSQYIETSRSYHNTKTLLHFYDPMVVIVPPNKTAADGMVGVSELVGKHYPANKKVTMARGCFDDTKGAVMVKNLSARDPSALGLDTYCKQYYLCLAAASATIRWIESERGVFITNHSLSVTFNGSFDHMNIDSTSVQTLEIIDPLHTELWGTSNKKKSLFQMLKTTKTTGGARLLRANLLQPLKDIQTINARLDCLDELVTNEELFFGLTQGLRKFPKESDKVLCHFCFKPKPVTDEVLKPANGRKSQMLISDIIILKTALDAIPFFSKVLKGAKSFLLRNIYQTVCENPKYENMRKRIGDIIDEDVVHSRAPFVACTQQCFAIKAGVDGLLDVARRSFCDTSEAIHNLANKYREEYNMPTLKIPYNIRQGFYFIIPQKDITDRLPNKFIQVVRHGKNVHCSSLELASLNVRNKSAAAECFFRTELCLEGLIDKIREDIGILTLLAEVLCLLDMIVNSFAHTISTKPVDRYTRPEFTDDGPMAINAGRHPILETLHTDFVPNNTFLSEASNMVLVMGPNMSGKSTYLHQICLIVILAQIGCYVPAQFASLRVVDRIFTRIGNGDNVENNSSTFMTEMKETAFIMQNASSKSLIVVDELGRATSSADGLAIAWSCCEHLLSVKAYTVFATHMESLSELATMYPNVNILHFEVDLRNDRLDFKFRLKDGVREVPHYGLLLARVAGLPASVIDAATSITSQITEQEMTRMDANCEEFQSLRMAYQVAQRLVCLKYSNQGDDYIREALRNLKEGYTAGRLT |